SNP Profiles of SCA 9 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AC	GG	CC	GG	AA	CG	AG	CT	GG	GG	AT	CC
1._RUQ_1064	_	_	AC	_	_	_	_	_	AG	_	GG	_	_	_
2._RUQ_1064	_	_	AC	_	CC	GG	AA	CG	AG	_	_	GG	AT	CC
3._SCA9	_	_	CC	_	CT	_	_	GG	AG	_	_	AG	AA	CC
4._RUQ_1064	AA	CC	AC	CC	GG	GG	AA	CG	AG	AG	GG	GG	AT	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	GG	GG	AA	CC	CT	TT	GG	GG	TT	AC	CC
1._RUQ_1064	_	CC	_	_	GG	AA	CC	_	TT	GG	GG	_	AC	CC
2._RUQ_1064	_	_	_	_	GG	AA	CC	_	_	_	_	_	_	GG
3._SCA9	_	_	_	_	CG	CC	CT	_	_	_	_	_	_	GG
4._RUQ_1064	_	CC	_	CC	GG	AA	GG	AG	_	CC	GG	AA	AC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	TT	AG	CC	CC	GG	GG	TT	TT	CT	CC	TT	CC	AA
1._RUQ_1064	_	_	AG	CC	_	_	_	_	TT	_	_	_	CC	_
2._RUQ_1064	GG	CT	_	_	CC	_	GG	TT	_	_	CC	_	GG	_
3._SCA9	CG	CT	_	_	CT	_	AG	AT	_	_	CT	_	GG	_
4._RUQ_1064	_	AG	AG	_	GG	CC	GG	_	AA	AG	GG	AA	GG	AA

Input profile: SCA_9 RUQ_1064

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._SCA_9 RUQ_1064

identical
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

2._SCA_9 RUQ_1064

82.5 %
20 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._SCA_9 SCA9

47.2 %
18 shared markers

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Center for Forestry Research and Technology Transfer, Vietnam

Location: CEFORTT

Jocelyn De Wever et al., 2019

4._SCA_9 RUQ_1064

47.2 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484